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bcbio GATK 3.3.0 test copied from 9tee4-p5p6p-bg7fkycb0stoxv8
rnaseq.cwl
Chimerascan starting from bam files V1.0
Whole ExomeSeq Pipeline Single Sample Collection V1.2
STAR-fusion-plug-n-play
STAR-fusion-blank
RNAseq read quantification (salmon) V1.0
Chimerascan starting from fastq files V1.0
STAR-fusion
prepare-data-matrix.cwl
Whole ExomeSeq Pipeline Multi Sample Collection V1.2
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Data transformation from the sequencer bcl files to fastq file format followed by fastqc and mutliqc quality control.
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